mmseq-1.0.11-19.fc40 RPM for ppc64le

From Fedora 40 for ppc64le / m

Software for fast, scalable haplotype and isoform expression
estimation using multi-mapping RNA-seq reads.  Example scripts are included.

Provides

• mmseq
• mmseq(ppc-64)

Requires

• /usr/bin/bash
• /usr/bin/perl
• /usr/bin/ruby
• /usr/bin/sh
• libboost_iostreams.so.1.83.0()(64bit)
• libboost_regex.so.1.83.0()(64bit)
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.17)(64bit)
• libc.so.6(GLIBC_2.32)(64bit)
• libc.so.6(GLIBC_2.33)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.38)(64bit)
• libflexiblas.so.3()(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libgomp.so.1()(64bit)
• libgomp.so.1(GOMP_1.0)(64bit)
• libgomp.so.1(GOMP_4.0)(64bit)
• libgomp.so.1(OMP_1.0)(64bit)
• libgsl.so.27()(64bit)
• libgslcblas.so.0()(64bit)
• libhts.so.3()(64bit)
• libm.so.6()(64bit)
• libm.so.6(GLIBC_2.17)(64bit)
• libm.so.6(GLIBC_2.29)(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.15)(64bit)
• libstdc++.so.6(CXXABI_1.3.8)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.26)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.32)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• perl(strict)
• perl-interpreter
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)
• ruby
• samtools

License

GPLv2+

Changelog

* Thu Jan 25 2024 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.11-19
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Sun Jan 21 2024 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.11-18
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Thu Jan 18 2024 Jonathan Wakely <jwakely@redhat.com> - 1.0.11-17
  - Rebuilt for Boost 1.83
* Thu Jul 20 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.11-16
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild
* Mon Feb 20 2023 Jonathan Wakely <jwakely@redhat.com> - 1.0.11-15
  - Rebuilt for Boost 1.81
* Thu Jan 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.11-14
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
* Tue Aug 23 2022 Mamoru TASAKA <mtasaka@fedoraproject.org> - 1.0.11-13
  - Rebuild for gsl-2.7.1
* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.11-12
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
* Wed May 04 2022 Thomas Rodgers <trodgers@redhat.com> - 1.0.11-11
  - Rebuilt for Boost 1.78

Files

/usr/bin/bam2hits
/usr/bin/ensembl_gtf_to_gff.pl
/usr/bin/extract_transcripts
/usr/bin/fastagrep.sh
/usr/bin/filterGTF.rb
/usr/bin/haploref.rb
/usr/bin/hitstools
/usr/bin/mmcollapse
/usr/bin/mmdiff
/usr/bin/mmseq
/usr/bin/mouse_strain_transcriptome.sh
/usr/bin/offsetGTF
/usr/bin/t2g_hits
/usr/bin/testregexp.rb
/usr/bin/usage.sh
/usr/lib/.build-id
/usr/lib/.build-id/22
/usr/lib/.build-id/22/1dc73a75aa8dbeae679ec77a18a8cf19dc1af7
/usr/lib/.build-id/34
/usr/lib/.build-id/34/85129b30036e1ef9ea8da70fe45e8959e2f393
/usr/lib/.build-id/3b
/usr/lib/.build-id/3b/bfe5a7fe8846055ca0fa32672342d74340a70e
/usr/lib/.build-id/3c
/usr/lib/.build-id/3c/4b8ced1e7b3efe96fa5f505706065897bb5f7d
/usr/lib/.build-id/58
/usr/lib/.build-id/58/63fce15878ef54b6368a5fa3d0f885a0332cef
/usr/lib/.build-id/9c
/usr/lib/.build-id/9c/d2da51a000c1b7e4adefc405340ead3f03d6fc
/usr/lib/.build-id/f3
/usr/lib/.build-id/f3/a21ca7f9a5d8e4f7a7ebac22fdc4ed31e47433
/usr/lib/.build-id/fb
/usr/lib/.build-id/fb/6d2d29572ff2acc7df6c3cfb543902b8a3a357
/usr/share/doc/mmseq
/usr/share/doc/mmseq/COPYING
/usr/share/doc/mmseq/README.md
/usr/share/doc/mmseq/doc
/usr/share/doc/mmseq/doc/332.mat
/usr/share/doc/mmseq/doc/countsDE.md
/usr/share/doc/mmseq/doc/dod2.mat
/usr/share/doc/mmseq/doc/mmdiff-model.png
/usr/share/doc/mmseq/doc/mmseq-collage.png

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Fabrice Bellet, Tue Jul 9 23:56:58 2024