VTK  9.2.5
vtkMNITagPointReader.h
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1/*=========================================================================
2
3 Program: Visualization Toolkit
4 Module: vtkMNITagPointReader.h
5
6 Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
7 All rights reserved.
8 See Copyright.txt or http://www.kitware.com/Copyright.htm for details.
9
10 This software is distributed WITHOUT ANY WARRANTY; without even
11 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
12 PURPOSE. See the above copyright notice for more information.
13
14=========================================================================*/
15/*=========================================================================
16
17Copyright (c) 2006 Atamai, Inc.
18
19Use, modification and redistribution of the software, in source or
20binary forms, are permitted provided that the following terms and
21conditions are met:
22
231) Redistribution of the source code, in verbatim or modified
24 form, must retain the above copyright notice, this license,
25 the following disclaimer, and any notices that refer to this
26 license and/or the following disclaimer.
27
282) Redistribution in binary form must include the above copyright
29 notice, a copy of this license and the following disclaimer
30 in the documentation or with other materials provided with the
31 distribution.
32
333) Modified copies of the source code must be clearly marked as such,
34 and must not be misrepresented as verbatim copies of the source code.
35
36THE COPYRIGHT HOLDERS AND/OR OTHER PARTIES PROVIDE THE SOFTWARE "AS IS"
37WITHOUT EXPRESSED OR IMPLIED WARRANTY INCLUDING, BUT NOT LIMITED TO,
38THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
39PURPOSE. IN NO EVENT SHALL ANY COPYRIGHT HOLDER OR OTHER PARTY WHO MAY
40MODIFY AND/OR REDISTRIBUTE THE SOFTWARE UNDER THE TERMS OF THIS LICENSE
41BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL OR CONSEQUENTIAL DAMAGES
42(INCLUDING, BUT NOT LIMITED TO, LOSS OF DATA OR DATA BECOMING INACCURATE
43OR LOSS OF PROFIT OR BUSINESS INTERRUPTION) ARISING IN ANY WAY OUT OF
44THE USE OR INABILITY TO USE THE SOFTWARE, EVEN IF ADVISED OF THE
45POSSIBILITY OF SUCH DAMAGES.
46
47=========================================================================*/
68#ifndef vtkMNITagPointReader_h
69#define vtkMNITagPointReader_h
70
71#include "vtkIOMINCModule.h" // For export macro
73#include "vtkStdString.h" // needed for std::string
74
75class vtkPolyData;
76class vtkPoints;
77class vtkStringArray;
78class vtkDoubleArray;
79class vtkIntArray;
80
81class VTKIOMINC_EXPORT vtkMNITagPointReader : public vtkPolyDataAlgorithm
82{
83public:
85
87 void PrintSelf(ostream& os, vtkIndent indent) override;
88
90
96
100 virtual const char* GetFileExtensions() { return ".tag"; }
101
105 virtual const char* GetDescriptiveName() { return "MNI tags"; }
106
110 virtual int CanReadFile(VTK_FILEPATH const char* name);
111
118 virtual int GetNumberOfVolumes();
119
125 virtual vtkPoints* GetPoints(int port);
126 virtual vtkPoints* GetPoints() { return this->GetPoints(0); }
127
134
141
148
155
159 virtual const char* GetComments();
160
161protected:
164
165 char* FileName;
167
169 char* Comments;
170
171 int ReadLine(istream& infile, std::string& linetext, std::string::iterator& pos);
172 int ReadLineAfterComments(istream& infile, std::string& linetext, std::string::iterator& pos);
173 int SkipWhitespace(istream& infile, std::string& linetext, std::string::iterator& pos, int nl);
175 istream& infile, std::string& linetext, std::string::iterator& pos, std::string& identifier);
177 istream& infile, std::string& linetext, std::string::iterator& pos, std::string& data);
179 istream& infile, std::string& linetext, std::string::iterator& pos, int* values, int count);
181 istream& infile, std::string& linetext, std::string::iterator& pos, double* values, int count);
182
183 virtual int ReadFile(vtkPolyData* output1, vtkPolyData* output2);
184
186 vtkInformation* request, vtkInformationVector** inInfo, vtkInformationVector* outInfo) override;
187
188private:
190 void operator=(const vtkMNITagPointReader&) = delete;
191};
192
193#endif
dynamic, self-adjusting array of double
a simple class to control print indentation
Definition: vtkIndent.h:40
Store zero or more vtkInformation instances.
Store vtkAlgorithm input/output information.
dynamic, self-adjusting array of int
Definition: vtkIntArray.h:46
A reader for MNI tag files.
~vtkMNITagPointReader() override
int ParseLeftHandSide(istream &infile, std::string &linetext, std::string::iterator &pos, std::string &identifier)
int SkipWhitespace(istream &infile, std::string &linetext, std::string::iterator &pos, int nl)
virtual vtkPoints * GetPoints()
int ParseFloatValues(istream &infile, std::string &linetext, std::string::iterator &pos, double *values, int count)
int ParseIntValues(istream &infile, std::string &linetext, std::string::iterator &pos, int *values, int count)
int ParseStringValue(istream &infile, std::string &linetext, std::string::iterator &pos, std::string &data)
virtual const char * GetComments()
Get any comments that are included in the file.
virtual int GetNumberOfVolumes()
Get the number of volumes specified by the file, which will be equal to one or two.
virtual const char * GetDescriptiveName()
Get the name of this file format.
virtual const char * GetFileExtensions()
Get the extension for this file format.
vtkGetFilePathMacro(FileName)
Set the file name.
virtual int CanReadFile(VTK_FILEPATH const char *name)
Test whether the specified file can be read.
static vtkMNITagPointReader * New()
int RequestData(vtkInformation *request, vtkInformationVector **inInfo, vtkInformationVector *outInfo) override
This is called by the superclass.
vtkSetFilePathMacro(FileName)
Set the file name.
int ReadLine(istream &infile, std::string &linetext, std::string::iterator &pos)
virtual vtkDoubleArray * GetWeights()
Get the weights.
virtual int ReadFile(vtkPolyData *output1, vtkPolyData *output2)
void PrintSelf(ostream &os, vtkIndent indent) override
Methods invoked by print to print information about the object including superclasses.
virtual vtkIntArray * GetPatientIds()
Get the patient ids.
virtual vtkStringArray * GetLabelText()
Get the labels.
virtual vtkIntArray * GetStructureIds()
Get the structure ids.
virtual vtkPoints * GetPoints(int port)
Get the points.
int ReadLineAfterComments(istream &infile, std::string &linetext, std::string::iterator &pos)
represent and manipulate 3D points
Definition: vtkPoints.h:40
Superclass for algorithms that produce only polydata as output.
concrete dataset represents vertices, lines, polygons, and triangle strips
Definition: vtkPolyData.h:91
a vtkAbstractArray subclass for strings
#define VTK_FILEPATH