Package Bio :: Package Emboss :: Module Applications
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Module Applications

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Code to interact with and run various EMBOSS programs.

These classes follow the AbstractCommandline interfaces for running programs.

Classes [hide private]
  Primer3Commandline
Commandline object for the Primer3 interface from EMBOSS.
  PrimerSearchCommandline
Commandline object for the primersearch program from EMBOSS.
  EProtDistCommandline
Commandline object for the eprotdist program from EMBOSS.
  ENeighborCommandline
Commandline object for the eneighbor program from EMBOSS.
  EProtParsCommandline
Commandline object for the eprotpars program from EMBOSS.
  EConsenseCommandline
Commandline object for the econsense program from EMBOSS.
  ESeqBootCommandline
Commandline object for the eseqboot program from EMBOSS.
  WaterCommandline
Commandline object for the water program from EMBOSS.
  FuzznucCommandline
Commandline object for the fuzznuc program from EMBOSS.
  Est2GenomeCommandline
Commandline object for the est2genome program from EMBOSS.
  ETandemCommandline
Commandline object for the etandem program from EMBOSS.
  EInvertedCommandline
Commandline object for the einverted program from EMBOSS.
  PalindromeCommandline
Commandline object for the palindrome program from EMBOSS.
  TranalignCommandline
Commandline object for the tranalign program from EMBOSS.
  DiffseqCommandline
Commandline object for the diffseq program from EMBOSS.
Variables [hide private]
  __package__ = 'Bio.Emboss'